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1. What
techniques do you currently use for the analysis of samples?
Various types of ELISA assays (sandwich assays and competitive
assays) with colorimetric, fluorescence and chemiluminescence
detections are used to analyze the samples
2. What
other technologies do you currently use?
Currently, QPS' Immunoanalytical group has four colorimetric readers,
a fluorescence reader, a luminescence reader, a electrochemiluminescence
(ECL) reader, and two Bio-Plex machines (Luminex technology).
Mulitplex
bead based assays have been validated using the Bio-Plex (Luminex
technology). These assays can help determine the amount of mulitple
analytes in a single sample.
3. What
program do you use to capture the data from your experiments?
We use the Softmax pro 3.1.2 to produce capture and analyze the
ELISA data and to calculate standard curve from our colorimetric
assays and the Softmax pro version 4.8 for the fluorescence assays.
In addition
we use the Softmax pro for Lmax version 1.1L to analyze the data
from the luminescence reader.
4. Do you
have a GLP compliant version of software for data management and
report writing?
QPS uses Watson LIMS v 6.4 for validation and sample analysis
projects.
5. How
many ELISA methods do you develop and validate in a year? What
is ratio of method development vs. method transfer?
Between 2005 and 2007, QPS' Immunoanalytcal group developed and
fully validated about 70 methods, and performed about 15 cross-species
and/or cross-matrix partial validations. The ratio of method development
to method transfer is approximately 4:1.
6. What
is the scope of your method development for GLP studies?
QPS will construct the ELISA assays based on the available antibody,
and perform antibody conjugation as necessary. The initial assay
conditions will be developed through a feasibility study.
The method
will have to demonstrate the following before going into validation:
►Minimum required dilution
►Precision and accuracy
of full assay range
►Analyte selectivity test
in matrix (minimum 6 lots)
►Linearity of dilution
(or parallelism if endogenous)
►Stabilities of focus
7. Do you
perform in-house validations?
We can validate a Sponsor's ELISA method or prepare our own ELISA
method for your specific analyte(s).
8. What
is the process to validate an ELISA assay? What are your validation
criteria for ELISA assay?
The ELISA assays are validated by multiple runs usually involve
more than one analyst. A typical validation includes 6 runs for
precision and accuracy, room temperature and freeze/thaw stability,
matrix selectivity, dilution test, hook effect, and long-term
frozen stability.
The scope
of the full or partial validation which follows the latest Crystal
City Bioanalytical Validation guideline, and the AAPS Journal
2007; 9 (1), E30-E42 article "Workshop/Conference Report
- Quantitative Bioanalytical Methods Validation and Implementation:
Best Practices for Chromatographic and Ligand Binding Assays"
is defined below. A validation report will be issued which will
be suitable for regulatory filing.
The full validation
will demonstrate:
►Precision and accuracy
(3-day quality controls with minimum 4 concentration levels, including
LLOQ)
►Dilution test (1 concentration
level, three dilution factors; n > 2)
►Matrix Selectivity test
(LLOQ level; six individual lots)
►Sample stability:
►Long term frozen stability
(at about one month, minimum of 2 concentration levels @ -20oC
or below; n = 5). The concentrations will lie within the validation
assay range.
►Room temperature stability
(minimum 4-hour cycle; 2 concentration levels; n = 5)
►Freeze/thaw stability
(one 24-hour cycle, and two 12-hour cycle; 2 concentration levels;
n = 5)
►Post preparative re-injection
reproducibility (minimum of 3 concentration levels in reconstitution
solvent in duplicates at room temperature)
9. Do you
run your standard curves and QC with matrix samples?
Yes, most ELISA assays for PK analysis are run with calibration
standards and QCs prepared in the intended matrix. For assays
that endogenous level is expected, calibration standards may be
prepared in buffer, while the QCs can be a combination of buffer
and matrix based preparation for different levels.
10. What
are some of the matrices you have worked on?
Mostly serum and plasma (EDTA>Heparin>Citrate) from mouse,
rat, rabbit, monkey, and human. We have also a small percentage
of urine samples. Occasionally we work with peripheral blood mononuclear
cell (PBMC) or platelet lysate, as well as tumor tissues. Recently
we were assigned to the analysis work that involves monkey milk.
For cellular assays we have performed whole blood incubation and
assays using established cell-lines.
11. How
many protocols and samples do you run in a year? What is the ratio
of clinical to preclinical/nonclinical samples?
Between 2005 and 2007, QPS' Immunoanalytical group worked on approximately
80 protocol-driven studies, which equates to approximately 122,000
samples. The ratio of clinical to preclinical/nonclinical samples
averages about 60/40 over the years. The exact ratio depends on
the development cycle of our sponsors.
12. Do
you have the capability to run assays with radioactive samples?
Currently we do not encourage studies using radioactivity.
13. How
many scientists work in your particular group?
23 scientists currently work in the Immunoanalytical-Protein Biomarker
group and will expand throughout the year.
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